Bioinformatician at SIB – Biomedical Data Science Facility, AGORA Cancer Research Center (2025-01 – Present)
Analyze large-scale cancer datasets to extract predictive and clinically relevant insights with focus on single-cell RNA-seq and spatial transcriptomics analysis.
- Analyze large-scale cancer datasets to extract predictive and clinically relevant insights
- Perform single-cell RNA-seq analyses including QC, clustering, differential expression, and cell-type annotation
- Conduct spatial transcriptomics analysis and integration with single-cell datasets
- Perform transcription factor activity and regulatory network analyses
- Develop automated pipelines for data ingestion, cleaning, validation, and reporting
- Build structured analytical workflows emphasizing reproducibility and auditability
- Collaborate with clinicians and researchers to translate analytical outputs into actionable insights for precision oncology
Bioinformatician / Postdoctoral Researcher at University of Geneva – Laboratory of Prof. Thierry Soldati (2021-01 – 2025-01)
Led end-to-end analysis of transcriptomic and genomic datasets in host–pathogen interaction studies, including dual RNA-seq analysis, whole-genome sequencing, and phylogenomic analyses.
- Led end-to-end analysis of transcriptomic and genomic datasets in host–pathogen interaction studies
- Performed dual bulk RNA-seq analysis of host and pathogen responses during infection
- Designed reproducible and scalable pipelines for RNA-seq and multi-omics analyses
- Conducted whole-genome sequencing analyses including quality control, filtering, genome assembly, mapping, and annotation
- Performed large-scale phylogenomic analyses of microbial genomes
- Integrated heterogeneous datasets with rich metadata to study immune responses to infection
- Developed analytical tools to facilitate collaborative data access and data exploration
- Contributed to publications in infectious disease and host–pathogen biology
PhD Researcher at University of Geneva (2016-01 – 2021-01)
Investigated innate immune responses to mycobacterial infection using advanced transcriptomic and statistical analyses.
- Investigated innate immune responses to mycobacterial infection
- Performed advanced transcriptomic and statistical analyses
- Developed computational workflows for infectious disease research
